Can I load whole 3D MRI image into my memory without performing patching or subsampling?

Balamurali_M (balamurali) December 3, 2019, 5:12pm 5

What is the best way to load niftii images (.nii) using pytorch dataloader?

Save the nib file to h5 file. Create a list with [(h5_file_name,slice_no),(h5_file_name,slice_no)]. Iterate this using dataloader, during runtime read the h5 file again and take out the slice. Let me know if you understand this, else i will share the pseudocode.

Will this help ?

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