Pixel wise classification resources

I have a dataset with 360 medical images in 2 classes, each containing 3 channels. I also have the pixel wise labels for each image. Now, I wish to perform pixel wise classification for the images. Can anyone please point me to some useful resources?

I think the project linked below would be an excellent way to get started - I also encourage exploring the links in the README.

But, 360 is a rather small amount of data…