RESNET error in implementation

1 
class ResidualBlock(nn.Module):
    def __init__(self, in_channels, out_channels, stride=1, downsample=None):
        super(ResidualBlock, self).__init__()
        self.conv1 = conv3x3(in_channels, out_channels, stride)
        self.bn1 = nn.BatchNorm2d(out_channels)
        self.relu = nn.ReLU(inplace=True)
        self.conv2 = conv3x3(out_channels, out_channels)
        self.bn2 = nn.BatchNorm2d(out_channels)
        self.downsample = downsample

    def forward(self, x):
        residual = x
        out = self.conv1(x)
        out = self.bn1(out)
        out = self.relu(out)
        out = self.conv2(out)
        out = self.bn2(out)
        if self.downsample:
            residual = self.downsample(x)
        out += residual
        out = self.relu(out)
        return out

# ResNet
class ResNet(nn.Module):
    def __init__(self, block, layers, num_classes=10):
        super(ResNet, self).__init__()
        self.in_channels = 16
        self.conv = conv3x3(3, 16)
        self.bn = nn.BatchNorm2d(16)
        self.relu = nn.ReLU(inplace=True)
        self.layer1 = self.make_layer(block, 16, layers[0])
        self.layer2 = self.make_layer(block, 32, layers[1], 2)
        self.layer3 = self.make_layer(block, 64, layers[2], 2)
        self.avg_pool = nn.AvgPool2d(8)
        self.fc = nn.Linear(64, num_classes)

    def make_layer(self, block, out_channels, blocks, stride=1):
        downsample = None
        if (stride != 1) or (self.in_channels != out_channels):
            downsample = nn.Sequential(
                conv3x3(self.in_channels, out_channels, stride=stride),
                nn.BatchNorm2d(out_channels))
        layers = []
        layers.append(block(self.in_channels, out_channels, stride, downsample))
        self.in_channels = out_channels
        for i in range(1, blocks):
            layers.append(block(out_channels, out_channels))
        return nn.Sequential(*layers)

    def forward(self, x):
        out = self.conv(x)
        out = self.bn(out)
        out = self.relu(out)
        out = self.layer1(out)
        out = self.layer2(out)
        out = self.layer3(out)
        out = self.avg_pool(out)
        out = out.view(out.size(0), -1)
        out = self.fc(out)
        return out

error : RuntimeError: Expected 5-dimensional input for 5-dimensional weight [16, 1, 3, 3, 3], but got 4-dimensional input of size [5529, 1, 5, 5] instead

2

Based on the error message it seems you are using nn.Conv3d in your model, which would expect a 5-dimensional input in the shape [batch_size, channels, depth, height, width], while you are passing a 4-dimensional input. You could either use nn.Conv2d layers or make sure the input has the expected shape.

3

@ptrblck

class ResidualBlock(nn.Module):
    def __init__(self, in_channels, out_channels, stride=1, downsample=None):
        super(ResidualBlock, self).__init__()
        self.conv1 = nn.Conv2d(in_channels, out_channels, 3)
        self.bn1 = nn.BatchNorm2d(out_channels)
        self.relu = nn.ReLU(inplace=True)
        self.conv2 = nn.Conv2d(out_channels, out_channels,3)
        self.bn2 = nn.BatchNorm2d(out_channels)
        self.downsample = downsample

    def forward(self, x):
        residual = x
        out = self.conv1(x)
        out = self.bn1(out)
        out = self.relu(out)
        out = self.conv2(out)
        out = self.bn2(out)
        if self.downsample:
            residual = self.downsample(x)
        #out += residual
        out = self.relu(out)
        return out

# ResNet
class ResNet(nn.Module):
    def __init__(self, block, layers, num_classes=2):
        super(ResNet, self).__init__()
        self.in_channels = 16
        self.conv = nn.Conv2d(1, 16,3)
        self.bn = nn.BatchNorm2d(16)
        self.relu = nn.ReLU(inplace=True)
        self.layer1 = self.make_layer(block, 16, layers[0])
        self.layer2 = self.make_layer(block, 32, layers[1], 2)
        self.layer3 = self.make_layer(block, 64, layers[2], 2)
        self.avg_pool = nn.AvgPool2d(8)
        self.fc = nn.Linear(64, num_classes)

    def make_layer(self, block, out_channels, blocks, stride=1):
        downsample = None
        if (stride != 1) or (self.in_channels != out_channels):
            downsample = nn.Sequential(
                nn.Conv2d(self.in_channels, out_channels, 3),
                nn.BatchNorm2d(out_channels))
        layers = []
        layers.append(block(self.in_channels, out_channels, stride, downsample))
        self.in_channels = out_channels
        for i in range(1, blocks):
            layers.append(block(out_channels, out_channels))
        return nn.Sequential(*layers)

    def forward(self, x):
        out = self.conv(x)
        out = self.bn(out)
        out = self.relu(out)
        out = self.layer1(out)
        out = self.layer2(out)
        out = self.layer3(out)
        out = self.avg_pool(out)
        out = out.view(out.size(0), -1)
        out = self.fc(out)
        return out

RuntimeError: Calculated padded input size per channel: (1 x 1). Kernel size: (3 x 3). Kernel size can’t be greater than actual input size

4

This new error is raised, if your input size is too small such that a convolution layer is failing as its kernel size is larger than the padded input.

5

@ptrblck

loss_train.backward()

RuntimeError: one of the variables needed for gradient computation has been modified by an inplace operation: [torch.FloatTensor [2232, 16, 37, 37]], which is output 0 of ReluBackward1, is at version 2; expected version 1 instead. Hint: enable anomaly detection to find the operation that failed to compute its gradient, with torch.autograd.set_detect_anomaly(True).