Runtime error while running a python code(Input and Target does not match)

[sanayam]

I have attached the screenshots of my code and the error. Can anyone tell me where I am going wrong?

[ptrblck]

The nn.MSELoss requires the input and target to have the same shape.
In your case the input has 3 channels, while the target only one.
Are you dealing with a segmentation use case and would like to classify each pixel?

[sanayam]

Well I am trying to run the Deep Image Prior’s Super-Resolution code. I am new to this. How can I make the input as 3 channels or otherwise?

[ptrblck]

You haven’t posted the code of your model, but I assume the last layer is a convolution with out_channels=3.
You can add code using three backticks `. It’ll make debugging easier and the search of this forum can find your code, if someone else has this problem.

Are you dealing with gray-scale images in general or did you convert the target to a single channel image?
If your targets are gray-scale, you could just use out_channels=1 in your last conv layer.

[sanayam]

Well, the images are from the Cryo Electron Microscopy datasets. It was working fine then I resized it. Now I am getting this error. (Still it works fine with the original image. But the resized one it doesnt. )
This is where I got the code. (https://github.com/DmitryUlyanov/deep-image-prior/)

[ptrblck]

Could you post your Dataset and the image processing code so that we could have a look?

[sanayam]

The dataset is in .tif format. I cannot post it here (as it takes only .png, .jpeg format)
Here’s the code. I havent changed anything from the Deep Image Prior. It’s the same.
Code:

from future import print_function
import matplotlib.pyplot as plt
%matplotlib inline

import argparse
import os
os.environ[‘CUDA_VISIBLE_DEVICES’] = ‘1’

import numpy as np
from models import *

import torch
import torch.optim

from skimage.measure import compare_psnr
from models.downsampler import Downsampler

from utils.sr_utils import *

torch.backends.cudnn.enabled = True
torch.backends.cudnn.benchmark =True
dtype = torch.cuda.FloatTensor

imsize = -1
factor = 4 # 8
enforse_div32 = ‘CROP’ # we usually need the dimensions to be divisible by a power of two (32 in this case)
PLOT = True

path_to_image = ‘data/sr/zebra_GT.png’

Load image and baselines

imgs = load_LR_HR_imgs_sr(path_to_image , imsize, factor, enforse_div32)

imgs[‘bicubic_np’], imgs[‘sharp_np’], imgs[‘nearest_np’] = get_baselines(imgs[‘LR_pil’], imgs[‘HR_pil’])

if PLOT:
plot_image_grid([imgs[‘HR_np’], imgs[‘bicubic_np’], imgs[‘sharp_np’], imgs[‘nearest_np’]], 4,12);
print (‘PSNR bicubic: %.4f PSNR nearest: %.4f’ % (
compare_psnr(imgs[‘HR_np’], imgs[‘bicubic_np’]),
compare_psnr(imgs[‘HR_np’], imgs[‘nearest_np’])))

input_depth = 32

INPUT = ‘noise’
pad = ‘reflection’
OPT_OVER = ‘net’
KERNEL_TYPE=‘lanczos2’

LR = 0.01
tv_weight = 0.0

OPTIMIZER = ‘adam’

if factor == 4:
num_iter = 2000
reg_noise_std = 0.03
elif factor == 8:
num_iter = 4000
reg_noise_std = 0.05
else:
assert False, ‘We did not experiment with other factors’

net_input = get_noise(input_depth, INPUT, (imgs[‘HR_pil’].size[1], imgs[‘HR_pil’].size[0])).type(dtype).detach()

NET_TYPE = ‘skip’ # UNet, ResNet
net = get_net(input_depth, ‘skip’, pad,
skip_n33d=128,
skip_n33u=128,
skip_n11=4,
num_scales=5,
upsample_mode=‘bilinear’).type(dtype)

mse = torch.nn.MSELoss().type(dtype)

img_LR_var = np_to_torch(imgs[‘LR_np’]).type(dtype)

downsampler = Downsampler(n_planes=3, factor=factor, kernel_type=KERNEL_TYPE, phase=0.5, preserve_size=True).type(dtype)

def closure():
global i, net_input

if reg_noise_std > 0:
    net_input = net_input_saved + (noise.normal_() * reg_noise_std)

out_HR = net(net_input)
out_LR = downsampler(out_HR)

total_loss = mse(out_LR, img_LR_var) 

if tv_weight > 0:
    total_loss += tv_weight * tv_loss(out_HR)
    
total_loss.backward()


psnr_LR = compare_psnr(imgs['LR_np'], torch_to_np(out_LR))
psnr_HR = compare_psnr(imgs['HR_np'], torch_to_np(out_HR))
print ('Iteration %05d    PSNR_LR %.3f   PSNR_HR %.3f' % (i, psnr_LR, psnr_HR), '\r', end='')
                  

psnr_history.append([psnr_LR, psnr_HR])

if PLOT and i % 100 == 0:
    out_HR_np = torch_to_np(out_HR)
    plot_image_grid([imgs['HR_np'], imgs['bicubic_np'], np.clip(out_HR_np, 0, 1)], factor=13, nrow=3)

i += 1

return total_loss

psnr_history =
net_input_saved = net_input.detach().clone()
noise = net_input.detach().clone()

i = 0
p = get_params(OPT_OVER, net, net_input)
optimize(OPTIMIZER, p, closure, LR, num_iter)

out_HR_np = np.clip(torch_to_np(net(net_input)), 0, 1)
result_deep_prior = put_in_center(out_HR_np, imgs[‘orig_np’].shape[1:])

plot_image_grid([imgs[‘HR_np’],
imgs[‘bicubic_np’],
out_HR_np], factor=4, nrow=1);

[ptrblck]

Could you check the shape of your loaded iamges:

imgs = load_LR_HR_imgs_sr(path_to_image , imsize, factor, enforse_div32)
imgs[‘bicubic_np’], imgs[‘sharp_np’], imgs[‘nearest_np’] = get_baselines(imgs[‘LR_pil’], imgs[‘HR_pil’])

Also, which part have you added to the working code to resize the images?

[sanayam]

I have attached the screenshot of the code for resizing and it’s output.

Also, I have not added it in the code. I saved the resized image and using it here. (Super-Resolution)

[ptrblck]

The code looks good.
Could you print the shapes of the loaded images (imgs['bicubic_np'], imgs['sharp_np'] and imgs['nearest_np'])?

It seems some or all of your images are single channel images, which yields the error message.

[sanayam]

I have attached the image of it. It is about 65536.

[sanayam]

I made a mistake at n_channel=1. Now it’s solved. Thank you